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CAVER Analyst Kozlíková, B., Šebestová, E., Šustr, V., Brezovský, J., Strnad, O., Daniel, L., Bednář, D., Pavelka, A., Maňák, M., Bezděka, M., Beneš, P., Kotry, M., Gora, A. W., Damborský, J., Sochor, J.: CAVER Analyst 1.0: Graphic Tool for Interactive Visualization and Analysis of Tunnels and Channels in Protein Structures, Bioinformatics, 30(18), 2014.
CAVER, CAVER Plugin Chovancová,E., Pavelka, A., Beneš, P., Strnad, O., Brezovský, J., Kozlíková, B., Gora, A., Šustr, V., Klvaňa, M., Medek, P., Biedermannová, L., Sochor, J., Damborský, J.: CAVER 3.0: A Tool for the Analysis of Transport Pathways in Dynamic Protein Structures, PLoS Computational Biology 8: e1002708, 8(10), 2012.
CAVER, CAVER Plugin Pavelka, A., Šebestová, E., Kozlíková, B., Brezovský, J., Sochor, J., Damborský, J.: CAVER: Algorithms for Analyzing Dynamics of Tunnels in Macromolecules, IEEE/ACM Transactions on Computational Biology and Bioinformatics, 13(3), 2016.
CaverDock Vavra, O., Filipovic, J., Plhak, J., Bednar, D., Marques, S., Brezovsky, J., Pavelka, A., Matyska, L., Damborsky, J.: CAVERDOCK: A New Tool for Analysis of Ligand Binding and Unbinding Based on Molecular Docking, In preparation, 2018.

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August 10, 2018

CAVER 3.0 was cited in the PLoS ONE journal in article called How does binding of agonist ligands...

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July 26, 2018

CAVER 3.0 was cited in the PLoS ONE journal in article called Insights into molecular mechanisms of...

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July 26, 2018

CAVER 3.0 and CAVER Analyst 1.0 were cited in the PLoS ONE journal in article called Modulating...

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